STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC10430.1Hypothetical protein; Could be a 3Fe-4S cluster-containing protein. (95 aa)    
Predicted Functional Partners:
APC10431.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.
 
 
 0.985
etfB_1
Electron transfer flavoprotein subunit beta.
 
 0.967
etfA_1
Electron transfer flavoprotein subunit alpha; Required for anaerobic carnitine reduction. May bring reductant to CaiA.
 
 0.963
ygcS
Inner membrane metabolite transport protein YgcS.
 
     0.874
caiA_1
Crotonobetainyl-CoA dehydrogenase.
 
 
 0.814
etfA_2
Electron transfer flavoprotein subunit alpha.
 
 0.771
etfB_2
Electron transfer flavoprotein subunit beta.
 
 0.756
caiA_2
Crotonobetainyl-CoA dehydrogenase; Catalyzes the reduction of crotonobetainyl-CoA to gamma- butyrobetainyl-CoA; Belongs to the acyl-CoA dehydrogenase family.
 
 
 0.734
caiB
Crotonobetainyl-CoA:carnitine CoA-transferase; Catalyzes the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA to L-carnitine to generate L-carnitinyl-CoA and gamma-butyrobetaine. Is also able to catalyze the reversible transfer of the CoA moiety from gamma-butyrobetainyl-CoA or L- carnitinyl-CoA to crotonobetaine to generate crotonobetainyl-CoA. Belongs to the CoA-transferase III family. CaiB subfamily.
 
     0.685
lcfB
Long-chain-fatty-acid--CoA ligase.
  
     0.554
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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