Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpB | cyoA | RB151_000310 | RB151_007510 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | 0.948 |
| atpB | cyoB | RB151_000310 | RB151_007500 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome bo(3) ubiquinol oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.900 |
| atpB | cyoC | RB151_000310 | RB151_007490 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | Cytochrome bo(3) ubiquinol oxidase subunit 3. | 0.992 |
| atpB | ndhC | RB151_000310 | RB151_026720 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.801 |
| atpB | nuoC | RB151_000310 | RB151_026700 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.781 |
| atpB | nuoH | RB151_000310 | RB151_026660 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.952 |
| atpB | nuoM | RB151_000310 | RB151_026610 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | NADH-quinone oxidoreductase subunit M. | 0.952 |
| atpB | nuoN | RB151_000310 | RB151_026600 | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.810 |
| cyoA | atpB | RB151_007510 | RB151_000310 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.948 |
| cyoA | cyoB | RB151_007510 | RB151_007500 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | Cytochrome bo(3) ubiquinol oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
| cyoA | cyoC | RB151_007510 | RB151_007490 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | Cytochrome bo(3) ubiquinol oxidase subunit 3. | 0.999 |
| cyoA | cyoD | RB151_007510 | RB151_007480 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | Cytochrome bo(3) ubiquinol oxidase subunit 4. | 0.999 |
| cyoA | cyoE | RB151_007510 | RB151_007470 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.999 |
| cyoA | ndhC | RB151_007510 | RB151_026720 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. | 0.918 |
| cyoA | nuoC | RB151_007510 | RB151_026700 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. | 0.992 |
| cyoA | nuoH | RB151_007510 | RB151_026660 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. | 0.983 |
| cyoA | nuoM | RB151_007510 | RB151_026610 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | NADH-quinone oxidoreductase subunit M. | 0.983 |
| cyoA | nuoN | RB151_007510 | RB151_026600 | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. | 0.901 |
| cyoB | atpB | RB151_007500 | RB151_000310 | Cytochrome bo(3) ubiquinol oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. | 0.900 |
| cyoB | cyoA | RB151_007500 | RB151_007510 | Cytochrome bo(3) ubiquinol oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | Cytochrome bo(3) ubiquinol oxidase subunit 2 precursor. | 0.999 |
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