STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdlBMultidrug resistance-like ATP-binding protein MdlB. (594 aa)    
Predicted Functional Partners:
yheI
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI.
 
 
0.984
artM_2
Arginine transport ATP-binding protein ArtM.
 
     
0.876
ybbL
Putative ABC transporter ATP-binding protein YbbL.
 
    
0.643
lrp_1
Leucine-responsive regulatory protein.
  
    0.585
phnT
Putative 2-aminoethylphosphonate import ATP-binding protein PhnT; Belongs to the ABC transporter superfamily.
 
    
0.572
bhsA
Multiple stress resistance protein BhsA precursor.
  
     0.564
APC10351.1
Hypothetical protein.
  
     0.546
mrpA_7
Major MR/P fimbria protein precursor.
  
     0.507
APC13793.1
Opacity-associated protein A LysM-like domain protein.
  
     0.497
amtB
Ammonia channel precursor.
   
   0.479
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.