Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
hpcE_2Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase. (209 aa)    
Predicted Functional Partners:
hpcE_1
Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase.
 
  
 
0.982
hpcD
5-carboxymethyl-2-hydroxymuconate Delta-isomerase.
 
 
 0.981
tesE
2-hydroxyhexa-2,4-dienoate hydratase.
 
 
 0.965
betB_1
NAD/NADP-dependent betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
   0.879
hpcB
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
  
 0.843
hpcH
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.574
btr
HTH-type transcriptional activator Btr.
 
  
 0.524
davD
Glutarate-semialdehyde dehydrogenase DavD; Belongs to the aldehyde dehydrogenase family.
  
   0.448
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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