STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eptCPhosphoethanolamine transferase EptC. (569 aa)    
Predicted Functional Partners:
yhbX
Putative phosphoethanolamine transferase YhbX.
  
  
0.943
rfaP
Lipopolysaccharide core heptose(I) kinase RfaP.
  
     0.769
rfaG
Lipopolysaccharide core biosynthesis protein RfaG.
  
     0.749
gspA_3
General stress protein A.
  
     0.727
gspA_2
General stress protein A.
  
     0.710
gspA_1
General stress protein A.
  
     0.666
APC10610.1
Hypothetical protein.
  
     0.562
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.
  
  
 0.530
fecA
Fe(3+) dicitrate transport protein FecA precursor.
  
     0.494
ecfT
Energy-coupling factor transporter transmembrane protein EcfT.
  
     0.489
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.