Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
APC10594.1Urea transporter. (329 aa)    
Predicted Functional Partners:
ureE_1
Urease accessory protein UreE.
 
   
 0.905
ureH
Urease accessory protein UreH.
 
   
 0.858
ureF_1
Urease accessory protein UreF.
 
   
 0.785
kch_2
Voltage-gated potassium channel Kch.
       0.683
ureG_1
Urease accessory protein UreG.
 
   
 0.625
APC11397.1
DNA-dependent helicase II.
  
     0.623
ureC_1
Urease subunit alpha.
 
   
 0.578
crcB_2
Putative fluoride ion transporter CrcB.
 
   
 0.485
ureB_1
Urease subunit beta.
 
   
 0.469
ybiR
Inner membrane protein YbiR.
       0.461
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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