STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC10604.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
klcA_1
Antirestriction protein KlcA.
 
    0.863
klcA_2
Antirestriction protein KlcA.
 
    0.802
APC10603.1
Hypothetical protein; Belongs to the UPF0758 family.
       0.735
APC10602.1
Hypothetical protein.
       0.732
klcA_3
Antirestriction protein KlcA.
  
    0.731
klcA_4
Antirestriction protein KlcA.
  
    0.725
nlpE
Lipoprotein NlpE precursor.
  
     0.557
APC12973.1
Hypothetical protein.
  
     0.554
APC13960.1
Hypothetical protein.
  
     0.522
chiP
Chitoporin precursor.
  
     0.492
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.