STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC10770.1SPFH domain / Band 7 family protein. (339 aa)    
Predicted Functional Partners:
ppnK_1
Inorganic polyphosphate/ATP-NAD kinase.
 
     0.952
APC10769.1
Bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase.
 
     0.860
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.767
APC11904.1
Ferredoxin.
  
 
 0.637
yqiK
Inner membrane protein YqiK.
  
  
 0.563
APC11332.1
Transposase DDE domain protein.
  
     0.549
ptrA_1
Protease 3 precursor.
  
 0.487
fimA_2
Type-1 fimbrial protein, A chain precursor.
  
     0.432
APC09735.1
ATPase involved in DNA repair.
  
 
 
 0.427
APC12555.1
Hypothetical protein.
  
     0.424
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.