STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppnK_1Inorganic polyphosphate/ATP-NAD kinase. (307 aa)    
Predicted Functional Partners:
APC10770.1
SPFH domain / Band 7 family protein.
 
     0.952
APC10769.1
Bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase.
 
     0.853
APC11904.1
Ferredoxin.
 
     0.515
APC11332.1
Transposase DDE domain protein.
  
     0.508
maeB
NADP-dependent malic enzyme.
   
 
 0.504
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.488
yqiK
Inner membrane protein YqiK.
  
     0.440
nadR
Trifunctional NAD biosynthesis/regulator protein NadR.
  
  
 0.439
APC09735.1
ATPase involved in DNA repair.
 
     0.415
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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