Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APC10788.1Glycerol-3-phosphate responsive antiterminator. (185 aa)    
Predicted Functional Partners:
lsrF
Putative aldolase LsrF.
 
     0.857
lyx_1
L-xylulose/3-keto-L-gulonate kinase.
 
     0.763
lyx_2
L-xylulose/3-keto-L-gulonate kinase.
 
     0.704
gatC
Galactitol permease IIC component.
 
     0.654
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
     0.616
yoaD
Putative 2-hydroxyacid dehydrogenase YoaD.
 
     0.596
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.548
glpK_1
Glycerol kinase; Belongs to the FGGY kinase family.
 
  
 0.402
glpK_2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.402
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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