Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gatCGalactitol permease IIC component. (418 aa)    
Predicted Functional Partners:
ptsH
Phosphocarrier protein HPr.
    
  0.903
ulaC_1
Ascorbate-specific phosphotransferase enzyme IIA component.
 
  
 0.746
ulaC_2
Ascorbate-specific phosphotransferase enzyme IIA component.
 
  
 0.700
ulaA_2
Ascorbate-specific permease IIC component UlaA.
 
  
 0.692
kbaZ
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ.
 
  
 0.678
ulaB
Ascorbate-specific phosphotransferase enzyme IIB component.
 
  
 0.671
yoaD
Putative 2-hydroxyacid dehydrogenase YoaD.
 
     0.670
APC10788.1
Glycerol-3-phosphate responsive antiterminator.
 
     0.654
lyx_2
L-xylulose/3-keto-L-gulonate kinase.
 
    0.652
ulaA_1
Ascorbate-specific permease IIC component UlaA.
 
     0.634
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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