Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
por_1Polyol:NADP oxidoreductase. (489 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase.
 
 
 0.957
uxaC
Uronate isomerase.
 
 
 0.947
mtlA
PTS system mannitol-specific EIICBA component.
  
  
 0.931
por_3
Polyol:NADP oxidoreductase.
  
  
 
0.902
licR
Putative licABCH operon regulator.
  
  
 0.681
uxaA_2
Altronate dehydratase.
 
  
 0.601
uxaA_1
Altronate dehydratase.
 
  
 0.548
fruB_1
Multiphosphoryl transfer protein.
 
  
 0.528
fruB_2
Multiphosphoryl transfer protein.
  
  
 0.466
fruB_3
Multiphosphoryl transfer protein.
  
  
 0.466
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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