STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC10886.1PTS system EIIBC component. (453 aa)    
Predicted Functional Partners:
APC13430.1
PTS system EIIBC component.
 
0.987
crr
Glucose-specific phosphotransferase enzyme IIA component.
 
 0.985
sacA
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.980
ptsH
Phosphocarrier protein HPr.
  
 
 0.921
ptsG
PTS system glucose-specific EIICBA component.
 
 0.893
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
 
 
0.886
bglF_2
PTS system beta-glucoside-specific EIIBCA component.
 
 
0.881
licT
Transcription antiterminator LicT.
 
 
 0.834
ybbH_1
Putative HTH-type transcriptional regulator YbbH.
 
  
 0.823
bglG
Cryptic beta-glucoside bgl operon antiterminator.
 
 
 0.820
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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