STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fcuAFerrichrome receptor FcuA precursor. (725 aa)    
Predicted Functional Partners:
APC10348.1
Fec operon regulator FecR.
 
 
 0.873
APC10926.1
Corrinoid ABC transporter substrate-binding protein.
 
   
 0.728
cirA_2
Colicin I receptor precursor.
  
  
 0.637
fes
Enterochelin esterase.
   
  
 0.617
cirA_1
Colicin I receptor precursor.
  
  
 0.581
btuB_2
Vitamin B12 transporter BtuB.
  
  
 0.554
APC12109.1
Gram-negative bacterial tonB protein.
 
 
 0.545
APC10350.1
Transport protein TonB.
 
 
 0.529
cirA_3
Colicin I receptor precursor.
  
  
 0.520
btuB_1
Vitamin B12 transporter BtuB precursor.
  
  
 0.508
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.