STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artPArginine transport ATP-binding protein ArtP. (242 aa)    
Predicted Functional Partners:
artI
Putative ABC transporter arginine-binding protein 2 precursor; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.993
artM_1
Arginine ABC transporter permease protein ArtM.
 
 0.989
artQ_1
Arginine ABC transporter permease protein ArtQ.
 
 
 0.988
ddpD
Putative D,D-dipeptide transport ATP-binding protein DdpD; Belongs to the ABC transporter superfamily.
 
    
0.835
gltK_1
Glutamate/aspartate transport system permease protein GltK.
 
     0.765
glnH
Glutamine-binding periplasmic protein precursor.
 
  
 0.765
yecS
Inner membrane amino-acid ABC transporter permease protein YecS.
  
     0.759
glnM
Putative glutamine ABC transporter permease protein GlnM.
 
     0.757
artQ_2
Arginine transport system permease protein ArtQ.
 
     0.756
gltK_2
Glutamate/aspartate transport system permease protein GltK.
  
     0.751
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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