Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APC10964.1 | aat | RB151_012790 | RB151_012780 | Putative ABC transporter ATP-binding protein. | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.793 |
| APC10964.1 | appB | RB151_012790 | RB151_020200 | Putative ABC transporter ATP-binding protein. | Cytochrome bd-II ubiquinol oxidase subunit 2. | 0.746 |
| APC10964.1 | appC | RB151_012790 | RB151_020210 | Putative ABC transporter ATP-binding protein. | Cytochrome bd-II ubiquinol oxidase subunit 1. | 0.705 |
| APC10964.1 | cydA | RB151_012790 | RB151_011260 | Putative ABC transporter ATP-binding protein. | Cytochrome bd-I ubiquinol oxidase subunit 1. | 0.825 |
| APC10964.1 | cydB | RB151_012790 | RB151_011270 | Putative ABC transporter ATP-binding protein. | Cytochrome bd-I ubiquinol oxidase subunit 2. | 0.858 |
| APC10964.1 | cydD | RB151_012790 | RB151_012800 | Putative ABC transporter ATP-binding protein. | ATP-binding/permease protein CydD. | 0.999 |
| APC10964.1 | ftsE | RB151_012790 | RB151_038290 | Putative ABC transporter ATP-binding protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.600 |
| APC10964.1 | infA | RB151_012790 | RB151_012770 | Putative ABC transporter ATP-binding protein. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.503 |
| APC10964.1 | ugpC | RB151_012790 | RB151_028280 | Putative ABC transporter ATP-binding protein. | Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. | 0.616 |
| APC10964.1 | ybbL | RB151_012790 | RB151_018700 | Putative ABC transporter ATP-binding protein. | Putative ABC transporter ATP-binding protein YbbL. | 0.765 |
| aat | APC10964.1 | RB151_012780 | RB151_012790 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Putative ABC transporter ATP-binding protein. | 0.793 |
| aat | cydD | RB151_012780 | RB151_012800 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-binding/permease protein CydD. | 0.793 |
| aat | infA | RB151_012780 | RB151_012770 | Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. | 0.616 |
| appB | APC10964.1 | RB151_020200 | RB151_012790 | Cytochrome bd-II ubiquinol oxidase subunit 2. | Putative ABC transporter ATP-binding protein. | 0.746 |
| appB | appC | RB151_020200 | RB151_020210 | Cytochrome bd-II ubiquinol oxidase subunit 2. | Cytochrome bd-II ubiquinol oxidase subunit 1. | 0.994 |
| appB | cydA | RB151_020200 | RB151_011260 | Cytochrome bd-II ubiquinol oxidase subunit 2. | Cytochrome bd-I ubiquinol oxidase subunit 1. | 0.969 |
| appB | cydB | RB151_020200 | RB151_011270 | Cytochrome bd-II ubiquinol oxidase subunit 2. | Cytochrome bd-I ubiquinol oxidase subunit 2. | 0.923 |
| appB | cydD | RB151_020200 | RB151_012800 | Cytochrome bd-II ubiquinol oxidase subunit 2. | ATP-binding/permease protein CydD. | 0.822 |
| appC | APC10964.1 | RB151_020210 | RB151_012790 | Cytochrome bd-II ubiquinol oxidase subunit 1. | Putative ABC transporter ATP-binding protein. | 0.705 |
| appC | appB | RB151_020210 | RB151_020200 | Cytochrome bd-II ubiquinol oxidase subunit 1. | Cytochrome bd-II ubiquinol oxidase subunit 2. | 0.994 |
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