STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cya_2Bifunctional hemolysin/adenylate cyclase precursor. (184 aa)    
Predicted Functional Partners:
cya_1
Calmodulin-sensitive adenylate cyclase precursor.
 
   
0.797
yfgC
TPR repeat-containing protein YfgC precursor; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
   
 
 0.634
hlyD
Hemolysin secretion protein D, chromosomal.
 
  
 0.570
ftsX
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.551
APC11004.1
ComEC family competence protein.
  
  
 0.536
apxIB_1
Toxin RTX-I translocation ATP-binding protein.
 
  
 0.528
apxIB_2
Toxin RTX-I translocation ATP-binding protein.
 
  
 0.517
APC10905.1
Hypothetical protein.
  
  
 0.509
APC10907.1
Hypothetical protein.
  
  
 0.509
aarA
Rhomboid protease AarA.
  
  
 0.508
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.