STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
putPSodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (494 aa)    
Predicted Functional Partners:
putA_1
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
  
 0.965
putA_2
Bifunctional protein PutA.
  
  
 0.614
yjiY
Inner membrane protein YjiY.
  
    0.541
cstA
Carbon starvation protein A.
  
    0.541
arcB_2
Aerobic respiration control sensor protein ArcB.
  
  
 0.487
alsT_2
Amino-acid carrier protein AlsT.
  
  
 0.461
sdcS_2
Sodium-dependent dicarboxylate transporter SdcS.
  
   
 0.460
mleN_1
Malate-2H(+)/Na(+)-lactate antiporter.
  
  
 0.453
mleN_2
Malate-2H(+)/Na(+)-lactate antiporter.
  
  
 0.449
alsT_1
Amino-acid carrier protein AlsT.
  
  
 0.447
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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