Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aacA4Aminoglycoside N(6')-acetyltransferase type 1. (200 aa)    
Predicted Functional Partners:
xerD_4
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
 
   
 0.738
folP_2
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
  
   
 0.720
APC11885.1
Acetyltransferase (GNAT) family protein.
  
     0.672
APC11880.1
Acetyltransferase (GNAT) family protein.
  
     0.666
APC14022.1
Polysaccharide biosynthesis protein.
 
    0.632
rmtB
16S rRNA (guanine(1405)-N(7))-methyltransferase.
  
   
 0.612
mprA_2
Transcriptional repressor MprA.
  
     0.591
APC11680.1
Hypothetical protein.
  
     0.576
APC11850.1
Methionine aminopeptidase.
  
     0.557
APC10321.1
Acetyltransferase (GNAT) family protein.
  
     0.554
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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