Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dhaLPTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL. (217 aa)    
Predicted Functional Partners:
dhaK
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK.
 0.999
APC13111.1
DNA-binding transcriptional regulator DhaR.
   
 
 0.881
glpA_1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
  
  0.855
glpA_2
Anaerobic glycerol-3-phosphate dehydrogenase subunit A; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 
 0.839
glpD
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.815
glpB
Anaerobic glycerol-3-phosphate dehydrogenase subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.
  
 
 0.804
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C.
     
  0.800
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.800
csbX_1
Alpha-ketoglutarate permease.
 
     0.770
ywlF
Putative sugar phosphate isomerase YwlF.
 
   
 0.736
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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