Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
znuC_1High-affinity zinc uptake system ATP-binding protein ZnuC. (296 aa)    
Predicted Functional Partners:
mntB_2
Manganese transport system membrane protein MntB.
 
 0.999
APC11581.1
Putative periplasmic iron-binding protein precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
mntB_1
Manganese transport system membrane protein MntB.
 
 0.998
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
 
 0.917
znuA
High-affinity zinc uptake system protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.825
zinT
Metal-binding protein ZinT precursor.
  
  
 0.713
zur
Zinc uptake regulation protein; Belongs to the Fur family.
  
  
 0.493
emtA
Endo-type membrane-bound lytic murein transglycosylase A precursor.
       0.444
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.441
APC11577.1
Hypothetical protein; Belongs to the fructosamine kinase family.
       0.408
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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