Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APC11661.1 | tyrR | RB151_019880 | RB151_019870 | Hypothetical protein. | Transcriptional regulatory protein TyrR. | 0.586 |
| gcvP | pheA | RB151_030050 | RB151_010150 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | P-protein. | 0.405 |
| gcvP | tyrA | RB151_030050 | RB151_010130 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | T-protein. | 0.417 |
| gcvP | tyrR | RB151_030050 | RB151_019870 | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | Transcriptional regulatory protein TyrR. | 0.495 |
| pheA | gcvP | RB151_010150 | RB151_030050 | P-protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.405 |
| pheA | tyrA | RB151_010150 | RB151_010130 | P-protein. | T-protein. | 0.988 |
| pheA | tyrR | RB151_010150 | RB151_019870 | P-protein. | Transcriptional regulatory protein TyrR. | 0.402 |
| pspC | tyrR | RB151_019830 | RB151_019870 | Phage shock protein C. | Transcriptional regulatory protein TyrR. | 0.402 |
| pspC | ycjF | RB151_019830 | RB151_019860 | Phage shock protein C. | Hypothetical protein. | 0.613 |
| pspC | ycjX | RB151_019830 | RB151_019850 | Phage shock protein C. | Hypothetical protein. | 0.542 |
| rpoN | tyrR | RB151_037530 | RB151_019870 | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulatory protein TyrR. | 0.772 |
| tyrA | gcvP | RB151_010130 | RB151_030050 | T-protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.417 |
| tyrA | pheA | RB151_010130 | RB151_010150 | T-protein. | P-protein. | 0.988 |
| tyrA | tyrR | RB151_010130 | RB151_019870 | T-protein. | Transcriptional regulatory protein TyrR. | 0.403 |
| tyrR | APC11661.1 | RB151_019870 | RB151_019880 | Transcriptional regulatory protein TyrR. | Hypothetical protein. | 0.586 |
| tyrR | gcvP | RB151_019870 | RB151_030050 | Transcriptional regulatory protein TyrR. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.495 |
| tyrR | pheA | RB151_019870 | RB151_010150 | Transcriptional regulatory protein TyrR. | P-protein. | 0.402 |
| tyrR | pspC | RB151_019870 | RB151_019830 | Transcriptional regulatory protein TyrR. | Phage shock protein C. | 0.402 |
| tyrR | rpoN | RB151_019870 | RB151_037530 | Transcriptional regulatory protein TyrR. | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.772 |
| tyrR | tyrA | RB151_019870 | RB151_010130 | Transcriptional regulatory protein TyrR. | T-protein. | 0.403 |
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