Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APC11675.1Hypothetical protein. (259 aa)    
Predicted Functional Partners:
APC11731.1
Hypothetical protein.
  
     0.689
APC10727.1
DTW domain protein.
 
      0.631
ytpA
Phospholipase YtpA.
  
     0.565
APC11852.1
Hypothetical protein.
  
   
 0.488
ccdB
Toxin CcdB.
  
     0.482
APC11064.1
Hypothetical protein.
  
     0.480
APC13086.1
Bacterial chaperone lipoprotein (PulS_OutS).
  
   
 0.434
APC11674.1
Hypothetical protein.
       0.430
papH_2
PAP fimbrial minor pilin protein precursor.
  
     0.421
papH_4
PAP fimbrial minor pilin protein precursor.
  
     0.412
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.