Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APC11706.1 | hemC | RB151_020330 | RB151_041980 | Periplasmic binding protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.654 |
| APC11706.1 | viuB | RB151_020330 | RB151_020180 | Periplasmic binding protein. | Vibriobactin utilization protein ViuB. | 0.667 |
| APC12256.1 | hemC | RB151_025850 | RB151_041980 | Periplasmic binding protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.654 |
| APC12256.1 | viuB | RB151_025850 | RB151_020180 | Periplasmic binding protein. | Vibriobactin utilization protein ViuB. | 0.667 |
| APC13288.1 | hemC | RB151_036390 | RB151_041980 | Periplasmic binding protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.654 |
| APC13288.1 | viuB | RB151_036390 | RB151_020180 | Periplasmic binding protein. | Vibriobactin utilization protein ViuB. | 0.667 |
| APC13502.1 | hemC | RB151_038540 | RB151_041980 | Periplasmic binding protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.654 |
| APC13502.1 | viuB | RB151_038540 | RB151_020180 | Periplasmic binding protein. | Vibriobactin utilization protein ViuB. | 0.667 |
| apxIB_1 | apxIB_2 | RB151_013080 | RB151_013100 | Toxin RTX-I translocation ATP-binding protein. | Toxin RTX-I translocation ATP-binding protein. | 0.869 |
| apxIB_1 | viuB | RB151_013080 | RB151_020180 | Toxin RTX-I translocation ATP-binding protein. | Vibriobactin utilization protein ViuB. | 0.686 |
| apxIB_2 | apxIB_1 | RB151_013100 | RB151_013080 | Toxin RTX-I translocation ATP-binding protein. | Toxin RTX-I translocation ATP-binding protein. | 0.869 |
| apxIB_2 | viuB | RB151_013100 | RB151_020180 | Toxin RTX-I translocation ATP-binding protein. | Vibriobactin utilization protein ViuB. | 0.686 |
| hemC | APC11706.1 | RB151_041980 | RB151_020330 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Periplasmic binding protein. | 0.654 |
| hemC | APC12256.1 | RB151_041980 | RB151_025850 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Periplasmic binding protein. | 0.654 |
| hemC | APC13288.1 | RB151_041980 | RB151_036390 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Periplasmic binding protein. | 0.654 |
| hemC | APC13502.1 | RB151_041980 | RB151_038540 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Periplasmic binding protein. | 0.654 |
| hemC | viuB | RB151_041980 | RB151_020180 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | Vibriobactin utilization protein ViuB. | 0.637 |
| hemS_3 | viuB | RB151_029670 | RB151_020180 | Hemin transport protein HemS. | Vibriobactin utilization protein ViuB. | 0.502 |
| lagD | thiQ_1 | RB151_022600 | RB151_022610 | Lactococcin-G-processing and transport ATP-binding protein LagD. | Thiamine import ATP-binding protein ThiQ. | 0.956 |
| lagD | viuB | RB151_022600 | RB151_020180 | Lactococcin-G-processing and transport ATP-binding protein LagD. | Vibriobactin utilization protein ViuB. | 0.686 |
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