Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APC10095.1 | APC11886.1 | RB151_003810 | RB151_022140 | YheO-like PAS domain protein. | Hypothetical protein; Belongs to the UPF0267 family. | 0.558 |
APC10095.1 | yciU | RB151_003810 | RB151_023570 | YheO-like PAS domain protein. | dsDNA-mimic protein; Belongs to the UPF0263 family. | 0.576 |
APC10095.1 | yecM | RB151_003810 | RB151_020760 | YheO-like PAS domain protein. | Hypothetical protein. | 0.584 |
APC10095.1 | yijD | RB151_003810 | RB151_043040 | YheO-like PAS domain protein. | Inner membrane protein YijD. | 0.676 |
APC11686.1 | APC11886.1 | RB151_020130 | RB151_022140 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0267 family. | 0.632 |
APC11686.1 | dcuD_2 | RB151_020130 | RB151_004780 | Hypothetical protein. | Putative cryptic C4-dicarboxylate transporter DcuD. | 0.694 |
APC11686.1 | menC | RB151_020130 | RB151_026530 | Hypothetical protein. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.568 |
APC11686.1 | ycdZ | RB151_020130 | RB151_015340 | Hypothetical protein. | Inner membrane protein YcdZ. | 0.613 |
APC11686.1 | yjjP | RB151_020130 | RB151_020120 | Hypothetical protein. | Inner membrane protein YjjP. | 0.992 |
APC11886.1 | APC10095.1 | RB151_022140 | RB151_003810 | Hypothetical protein; Belongs to the UPF0267 family. | YheO-like PAS domain protein. | 0.558 |
APC11886.1 | APC11686.1 | RB151_022140 | RB151_020130 | Hypothetical protein; Belongs to the UPF0267 family. | Hypothetical protein. | 0.632 |
APC11886.1 | dcuD_2 | RB151_022140 | RB151_004780 | Hypothetical protein; Belongs to the UPF0267 family. | Putative cryptic C4-dicarboxylate transporter DcuD. | 0.706 |
APC11886.1 | menC | RB151_022140 | RB151_026530 | Hypothetical protein; Belongs to the UPF0267 family. | O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). | 0.654 |
APC11886.1 | ycdZ | RB151_022140 | RB151_015340 | Hypothetical protein; Belongs to the UPF0267 family. | Inner membrane protein YcdZ. | 0.754 |
APC11886.1 | yciU | RB151_022140 | RB151_023570 | Hypothetical protein; Belongs to the UPF0267 family. | dsDNA-mimic protein; Belongs to the UPF0263 family. | 0.703 |
APC11886.1 | yecM | RB151_022140 | RB151_020760 | Hypothetical protein; Belongs to the UPF0267 family. | Hypothetical protein. | 0.585 |
APC11886.1 | yihD | RB151_022140 | RB151_003530 | Hypothetical protein; Belongs to the UPF0267 family. | Hypothetical protein. | 0.528 |
APC11886.1 | yijD | RB151_022140 | RB151_043040 | Hypothetical protein; Belongs to the UPF0267 family. | Inner membrane protein YijD. | 0.649 |
APC11886.1 | yjjP | RB151_022140 | RB151_020120 | Hypothetical protein; Belongs to the UPF0267 family. | Inner membrane protein YjjP. | 0.555 |
dcuD_2 | APC11686.1 | RB151_004780 | RB151_020130 | Putative cryptic C4-dicarboxylate transporter DcuD. | Hypothetical protein. | 0.694 |
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