Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ymfDBacillibactin exporter. (388 aa)    
Predicted Functional Partners:
stp_1
Multidrug resistance protein stp.
  
     0.735
mdtL_1
Multidrug resistance protein MdtL.
  
     0.702
APC10987.1
Putative multidrug-efflux transporter.
  
     0.633
APC09739.1
Putative multidrug-efflux transporter.
  
     0.620
mdtL_2
Multidrug resistance protein MdtL.
  
     0.551
bcr_3
Bicyclomycin resistance protein.
  
     0.482
ydhC_2
Inner membrane transport protein YdhC.
  
     0.452
emrK_1
Putative multidrug resistance protein EmrK.
  
   0.402
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.