STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiQ_1Thiamine import ATP-binding protein ThiQ. (220 aa)    
Predicted Functional Partners:
lagD
Lactococcin-G-processing and transport ATP-binding protein LagD.
     0.956
thiQ_2
Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
  
  
 
0.923
dsbA_2
Thiol:disulfide interchange protein DsbA precursor.
 
     0.828
thiB
Thiamine-binding periplasmic protein precursor.
     
  0.800
cysW_2
Sulfate transport system permease protein CysW.
     
  0.800
macA_2
Macrolide export protein MacA.
  
    0.786
APC11931.1
Hypothetical protein.
       0.773
ecfA1_1
Energy-coupling factor transporter ATP-binding protein EcfA1.
  
     0.720
viuB
Vibriobactin utilization protein ViuB.
   
   0.686
dnaK_1
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
     0.675
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.