Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APC09832.1 | ydgK | RB151_001160 | RB151_023050 | Hypothetical protein. | Inner membrane protein YdgK. | 0.774 |
| APC11975.1 | ydgJ | RB151_023030 | RB151_023040 | Hypothetical protein. | Putative oxidoreductase YdgJ. | 0.616 |
| APC11975.1 | ydgK | RB151_023030 | RB151_023050 | Hypothetical protein. | Inner membrane protein YdgK. | 0.422 |
| arcB_2 | ydgK | RB151_037310 | RB151_023050 | Aerobic respiration control sensor protein ArcB. | Inner membrane protein YdgK. | 0.424 |
| rnfA | rnfB | RB151_023060 | RB151_023070 | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.995 |
| rnfA | rnfC | RB151_023060 | RB151_023080 | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.992 |
| rnfA | rnfD_1 | RB151_023060 | RB151_023090 | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Electron transport complex protein RnfD. | 0.984 |
| rnfA | ydgK | RB151_023060 | RB151_023050 | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | Inner membrane protein YdgK. | 0.743 |
| rnfB | rnfA | RB151_023070 | RB151_023060 | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.995 |
| rnfB | rnfC | RB151_023070 | RB151_023080 | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.996 |
| rnfB | rnfD_1 | RB151_023070 | RB151_023090 | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Electron transport complex protein RnfD. | 0.982 |
| rnfB | ydgK | RB151_023070 | RB151_023050 | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Inner membrane protein YdgK. | 0.692 |
| rnfC | rnfA | RB151_023080 | RB151_023060 | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.992 |
| rnfC | rnfB | RB151_023080 | RB151_023070 | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.996 |
| rnfC | rnfD_1 | RB151_023080 | RB151_023090 | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | Electron transport complex protein RnfD. | 0.993 |
| rnfC | ydgK | RB151_023080 | RB151_023050 | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | Inner membrane protein YdgK. | 0.599 |
| rnfD_1 | rnfA | RB151_023090 | RB151_023060 | Electron transport complex protein RnfD. | Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. | 0.984 |
| rnfD_1 | rnfB | RB151_023090 | RB151_023070 | Electron transport complex protein RnfD. | Electron transport complex protein rnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.982 |
| rnfD_1 | rnfC | RB151_023090 | RB151_023080 | Electron transport complex protein RnfD. | Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. | 0.993 |
| rnfD_1 | ydgK | RB151_023090 | RB151_023050 | Electron transport complex protein RnfD. | Inner membrane protein YdgK. | 0.532 |
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