STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeaDPutative glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (293 aa)    
Predicted Functional Partners:
pgm
Phosphoglucomutase.
     
 0.920
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.915
bglB_2
6-phospho-beta-glucosidase BglB; Belongs to the glycosyl hydrolase 1 family.
     
 0.901
bglH
Aryl-phospho-beta-D-glucosidase BglH.
     
 0.901
malX
PTS system maltose- and glucose-specific EIICB component.
     
  0.900
crr
Glucose-specific phosphotransferase enzyme IIA component.
     
  0.900
chbF
6-phospho-beta-glucosidase.
     
  0.900
eda_1
KHG/KDPG aldolase.
    
 0.812
eda_2
Putative KHG/KDPG aldolase.
    
 0.812
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
  0.807
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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