Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nanAN-acetylneuraminate lyase. (296 aa)    
Predicted Functional Partners:
nanK
N-acetylmannosamine kinase.
 
 
 0.984
nanE
Putative N-acetylmannosamine-6-phosphate 2-epimerase.
 
  
 0.854
ybbH_3
Putative HTH-type transcriptional regulator YbbH.
    
  0.722
sglT_1
Sodium/glucose cotransporter.
 
  
 0.659
APC12830.1
Arylsulfatase.
  
     0.639
citF
Citrate lyase alpha chain.
   
    0.636
citX
Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase.
   
    0.621
betC
Choline-sulfatase.
  
     0.572
pheA
P-protein.
  
  
 0.553
tabA
Toxin-antitoxin biofilm protein TabA.
 
  
 0.533
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.