Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phoQVirulence sensor histidine kinase PhoQ. (488 aa)    
Predicted Functional Partners:
phoP
Virulence transcriptional regulatory protein PhoP.
 0.999
arcB_2
Aerobic respiration control sensor protein ArcB.
 
 
 0.919
rcsD
Phosphotransferase RcsD.
 
 
 0.795
APC10026.1
AsmA family protein.
  
     0.760
helD
Helicase IV.
  
     0.729
APC11970.1
Hypothetical protein; DNA replication terminus site-binding protein.
  
     0.710
ompD
Outer membrane porin protein OmpD precursor; Belongs to the Gram-negative porin family.
  
  
 0.708
bhsA
Multiple stress resistance protein BhsA precursor.
  
     0.703
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 
 0.695
APC10351.1
Hypothetical protein.
  
     0.691
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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