STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmsB_4Anaerobic dimethyl sulfoxide reductase chain B. (182 aa)    
Predicted Functional Partners:
ynfE_2
Putative dimethyl sulfoxide reductase chain YnfE precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   0.925
APC12241.1
DMSO reductase anchor subunit (DmsC).
 
    0.892
dmsA_2
Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   0.764
ynfF
Putative dimethyl sulfoxide reductase chain YnfF precursor.
  
   0.740
dmsA_1
Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.699
ynfE_3
Putative dimethyl sulfoxide reductase chain YnfE precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.693
dmsA_4
Dimethyl sulfoxide reductase DmsA precursor.
  
   0.691
ynfE_1
Putative dimethyl sulfoxide reductase chain YnfE precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.686
dmsA_3
Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   0.664
ttrA
Tetrathionate reductase subunit A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
   0.583
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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