STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynfE_2Putative dimethyl sulfoxide reductase chain YnfE precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (776 aa)    
Predicted Functional Partners:
dmsB_4
Anaerobic dimethyl sulfoxide reductase chain B.
   0.925
APC12241.1
DMSO reductase anchor subunit (DmsC).
 
   0.858
moeA
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.781
moaC
Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
   
 0.741
dmsB_3
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.701
dmsB_5
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.699
dmsB_6
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.698
moaA
Cyclic pyranopterin monophosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.691
dmsB_1
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.684
dmsD_2
Tat proofreading chaperone DmsD.
 
   0.680
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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