Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lacYLactose permease. (427 aa)    
Predicted Functional Partners:
narG
Respiratory nitrate reductase 1 alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.642
narJ
Nitrate reductase molybdenum cofactor assembly chaperone NarJ.
  
  
 0.612
sacA
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
   
 0.604
fucP
L-fucose-proton symporter.
     
 0.589
narH
Respiratory nitrate reductase 1 beta chain.
  
  
 0.564
APC11822.1
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
  
     0.522
yeeX
Hypothetical protein; Belongs to the UPF0265 family.
       0.500
narI
Respiratory nitrate reductase 1 gamma chain.
  
  
 0.486
yajR
Inner membrane transport protein YajR.
      
 0.468
APC12953.1
Phage capsid family protein.
   
    0.453
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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