Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmuU_1Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (364 aa)    
Predicted Functional Partners:
fhuC_1
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.982
APC12256.1
Periplasmic binding protein.
 
   0.969
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
 
 0.916
APC11706.1
Periplasmic binding protein.
 
   0.847
APC13288.1
Periplasmic binding protein.
 
   0.842
yfmC
Fe(3+)-citrate-binding protein YfmC precursor.
 
 
 0.841
APC13502.1
Periplasmic binding protein.
 
   0.840
APC10172.1
Putative ABC transporter ATP-binding protein.
 
 
 0.834
APC13292.1
Putative ABC transporter ATP-binding protein.
 
 
 0.815
APC10926.1
Corrinoid ABC transporter substrate-binding protein.
 
   0.812
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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