STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacC_2Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. (311 aa)    
Predicted Functional Partners:
fruA_1
PTS system fructose-specific EIIBC component.
 
 
 0.999
fruA_2
PTS system fructose-specific EIIBC component.
 
 
 0.999
fruB_3
Multiphosphoryl transfer protein.
 
  
 0.957
fruB_1
Multiphosphoryl transfer protein.
 
  
 0.956
fruB_2
Multiphosphoryl transfer protein.
 
  
 0.952
pfkA
6-phosphofructokinase isozyme 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
  
  
 0.923
fbaA
Fructose-bisphosphate aldolase class 2; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
 
 0.922
lsrF
Putative aldolase LsrF.
  
 
 0.911
fbp
Fructose-1,6-bisphosphatase class 1; Belongs to the FBPase class 1 family.
     
 0.911
lacC_1
Tagatose-6-phosphate kinase.
  
  
 
0.901
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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