STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynfE_3Putative dimethyl sulfoxide reductase chain YnfE precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (761 aa)    
Predicted Functional Partners:
dmsB_5
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.956
dmsC_4
Anaerobic dimethyl sulfoxide reductase chain C.
 
   0.930
dmsD_3
Tat proofreading chaperone DmsD.
 
   0.868
dmsB_6
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.832
dmsB_3
Anaerobic dimethyl sulfoxide reductase chain B.
   0.829
dmsD_4
Tat proofreading chaperone DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.
 
   0.814
dmsD_5
Tat proofreading chaperone DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.
 
   0.808
dmsB_1
Anaerobic dimethyl sulfoxide reductase chain B.
 
   0.805
dmsD_2
Tat proofreading chaperone DmsD.
 
   0.803
dmsD_1
Tat proofreading chaperone DmsD.
 
   0.799
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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