STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtlRMannitol operon repressor. (176 aa)    
Predicted Functional Partners:
mtlA
PTS system mannitol-specific EIICBA component.
 
   
 0.928
ptsH
Phosphocarrier protein HPr.
    
   0.747
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
 
  
 0.729
pgpB_1
Phosphatidylglycerophosphatase B.
  
     0.670
APC12079.1
Hypothetical protein.
  
     0.616
APC09868.1
Hypothetical protein.
 
     0.609
mukE
Chromosome partition protein MukE; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.
  
     0.605
nadR
Trifunctional NAD biosynthesis/regulator protein NadR.
  
     0.575
yeeX
Hypothetical protein; Belongs to the UPF0265 family.
  
     0.575
APC13783.1
Bacterial protein of unknown function.
  
     0.574
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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