STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtlDMannitol-1-phosphate 5-dehydrogenase. (386 aa)    
Predicted Functional Partners:
mtlA
PTS system mannitol-specific EIICBA component.
 
 0.999
fruB_2
Multiphosphoryl transfer protein.
 
 
 0.984
pfkA
6-phosphofructokinase isozyme 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
 
  
 0.921
manA
Mannose-6-phosphate isomerase.
  
  
 0.918
kdgK_2
2-dehydro-3-deoxygluconokinase.
    
 0.910
yniC
2-deoxyglucose-6-phosphate phosphatase.
    
 0.903
yfbT
Sugar phosphatase YfbT.
    
 0.902
glpX
Fructose-1,6-bisphosphatase 1 class 2.
     
 0.901
mak
Fructokinase.
     
 0.900
fbp
Fructose-1,6-bisphosphatase class 1; Belongs to the FBPase class 1 family.
     
  0.900
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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