Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mtlAPTS system mannitol-specific EIICBA component. (628 aa)    
Predicted Functional Partners:
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
 
 
 0.999
fruB_2
Multiphosphoryl transfer protein.
 
0.994
ptsH
Phosphocarrier protein HPr.
 
 
 0.988
fruA_1
PTS system fructose-specific EIIBC component.
 
  
 0.984
fruA_2
PTS system fructose-specific EIIBC component.
 
  
 0.984
licR
Putative licABCH operon regulator.
 
  
 0.983
fruB_3
Multiphosphoryl transfer protein.
 
 
0.949
fruB_1
Multiphosphoryl transfer protein.
 
 
0.948
uxaB
Altronate oxidoreductase.
 
  
 0.940
mtlR
Mannitol operon repressor.
 
   
 0.936
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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