Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APC12452.1 | pbpF | RB151_027930 | RB151_027920 | Hypothetical protein; Protects the bacterial cell from host peptidases. | Penicillin-binding protein 1F. | 0.928 |
| mrcA | mrcB | RB151_000790 | RB151_034080 | Penicillin-binding protein 1A. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.951 |
| mrcA | pbpF | RB151_000790 | RB151_027920 | Penicillin-binding protein 1A. | Penicillin-binding protein 1F. | 0.925 |
| mrcB | mrcA | RB151_034080 | RB151_000790 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.951 |
| mrcB | pbpF | RB151_034080 | RB151_027920 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1F. | 0.911 |
| ndk | pbpF | RB151_027910 | RB151_027920 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Penicillin-binding protein 1F. | 0.412 |
| pbpF | APC12452.1 | RB151_027920 | RB151_027930 | Penicillin-binding protein 1F. | Hypothetical protein; Protects the bacterial cell from host peptidases. | 0.928 |
| pbpF | mrcA | RB151_027920 | RB151_000790 | Penicillin-binding protein 1F. | Penicillin-binding protein 1A. | 0.925 |
| pbpF | mrcB | RB151_027920 | RB151_034080 | Penicillin-binding protein 1F. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.911 |
| pbpF | ndk | RB151_027920 | RB151_027910 | Penicillin-binding protein 1F. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.412 |