Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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speABiosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (634 aa)    
Predicted Functional Partners:
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.
  
 
 0.942
speB_2
N(1)-aminopropylagmatine ureohydrolase; Belongs to the arginase family.
  
 
 0.929
adiA
Biodegradative arginine decarboxylase.
     
 0.921
argH
Argininosuccinate lyase.
     
 0.838
frc_1
Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family.
      
 0.636
APC12738.1
Site-specific tyrosine recombinase XerC.
       0.620
ramA_2
(R)-stereoselective amidase.
  
  
 0.464
fabD
Malonyl CoA-acyl carrier protein transacylase.
   
    0.449
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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