STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
nrfACytochrome c-552 precursor; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (432 aa)    
Predicted Functional Partners:
nrfB
Cytochrome c-type protein NrfB precursor.
 
  
 0.955
nrfD
Polysulfide reductase, NrfD.
 
  
 0.940
napB
Periplasmic nitrate reductase, electron transfer subunit precursor; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
 
 0.925
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.924
napA
Periplasmic nitrate reductase precursor; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
   
 
 0.924
narG
Respiratory nitrate reductase 1 alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.914
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.907
glnA
Glutamine synthetase.
     
 0.907
narI
Respiratory nitrate reductase 1 gamma chain.
     
 0.902
APC10053.1
Nitronate monooxygenase.
     
  0.900
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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