STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaSPutative tagatose-6-phosphate ketose/aldose isomerase. (394 aa)    
Predicted Functional Partners:
kbaZ
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ.
 
  
 0.960
agaC
N-acetylgalactosamine permease IIC component 1.
 
  
 0.957
levE
Fructose-specific phosphotransferase enzyme IIB component.
 
  
 0.941
manZ_2
Mannose permease IID component.
 
  
 0.913
manX_1
PTS system mannose-specific EIIAB component.
 
  
 0.857
manX_2
PTS system mannose-specific EIIAB component.
 
  
 0.856
nagA_3
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.846
srlR_1
Glucitol operon repressor.
 
    0.788
nagA_2
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.686
manY
Mannose permease IIC component.
 
  
 0.682
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.