Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sdpRTranscriptional repressor SdpR. (111 aa)    
Predicted Functional Partners:
arsB
Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.
 
  
 0.828
arsA
Arsenical pump-driving ATPase.
     
 0.753
arsD
Arsenical resistance operon trans-acting repressor ArsD.
     
 0.730
arsC_2
Arsenate reductase.
     
 0.649
bigR
Biofilm growth-associated repressor.
  
     0.571
copA
Copper-exporting P-type ATPase A.
 
  
 0.512
APC12839.1
Nicotinamidase/pyrazinamidase.
       0.461
zntA
Lead, cadmium, zinc and mercury-transporting ATPase.
  
  
 0.401
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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