STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC12956.1Phage portal protein. (445 aa)    
Predicted Functional Partners:
APC12953.1
Phage capsid family protein.
 
 
 
 0.979
APC12958.1
Phage terminase, small subunit.
 
  
 0.968
APC12957.1
Phage Terminase.
 
   
 0.962
APC12954.1
ATP-dependent Clp protease proteolytic subunit.
 
  
 0.961
APC12955.1
Hypothetical protein.
 
  
 0.959
APC12960.1
Hypothetical protein.
 
  
 0.915
APC12950.1
Phage head-tail joining protein.
 
 
 0.909
APC12951.1
Phage gp6-like head-tail connector protein.
  
   0.881
APC12949.1
Hypothetical protein.
 
     0.730
APC12869.1
Head binding protein.
  
   0.692
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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