Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APC13028.1Dihydropyrimidine dehydrogenase subunit A. (409 aa)    
Predicted Functional Partners:
glpA_1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
   
 0.984
glpR_2
Glycerol-3-phosphate regulon repressor.
  
    0.662
glpK_1
Glycerol kinase; Belongs to the FGGY kinase family.
 
  
 0.660
andAb
Anthranilate 1,2-dioxygenase ferredoxin subunit.
  
 
 0.635
APC13163.1
Hypothetical protein.
  
    0.590
pcoC
Copper resistance protein C precursor.
    
   0.568
norV
Anaerobic nitric oxide reductase flavorubredoxin.
     
 0.567
APC13031.1
Ethanolamine utilization protein, EutH.
 
     0.512
APC13026.1
Hypothetical protein.
       0.450
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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