STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APC13031.1Ethanolamine utilization protein, EutH. (414 aa)    
Predicted Functional Partners:
glpK_1
Glycerol kinase; Belongs to the FGGY kinase family.
      0.738
pduA_3
Propanediol utilization protein PduA.
 
  
 0.552
glpA_1
Anaerobic glycerol-3-phosphate dehydrogenase subunit A.
 
     0.524
APC13028.1
Dihydropyrimidine dehydrogenase subunit A.
 
     0.513
pduA_4
Propanediol utilization protein PduA.
 
  
 0.513
pduA_2
Propanediol utilization protein PduA.
 
  
 0.498
pduA_1
Propanediol utilization protein PduA.
 
  
 0.496
ybbY
Putative purine permease YbbY.
  
     0.462
ccmL
Carbon dioxide concentrating mechanism protein CcmL.
 
  
 0.446
pduL
Phosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
     0.443
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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