STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fepEFerric enterobactin transport protein FepE. (373 aa)    
Predicted Functional Partners:
APC12268.1
Hypothetical protein.
  
     0.751
qseG
Quorum-sensing regulator protein G precursor.
  
     0.728
wbpA
UDP-N-acetyl-D-glucosamine 6-dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.
 
  
 0.726
uspB
Universal stress protein B.
  
     0.705
APC12219.1
Hypothetical protein.
  
     0.705
tomB
Hha toxicity modulator TomB.
  
     0.694
yhjK
Biofilm formation regulator HmsP.
  
     0.685
APC12068.1
Hypothetical protein.
  
     0.674
papK
Fimbrial adapter PapK precursor.
  
     0.665
APC13960.1
Hypothetical protein.
  
     0.660
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.