Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
fepEFerric enterobactin transport protein FepE. (373 aa)    
Predicted Functional Partners:
APC12268.1
Hypothetical protein.
  
     0.751
fes
Enterochelin esterase.
  
   
 0.738
qseG
Quorum-sensing regulator protein G precursor.
  
     0.728
uspB
Universal stress protein B.
  
     0.705
APC12219.1
Hypothetical protein.
  
     0.705
tomB
Hha toxicity modulator TomB.
  
     0.694
yhjK
Biofilm formation regulator HmsP.
  
     0.685
APC12068.1
Hypothetical protein.
  
     0.674
papK
Fimbrial adapter PapK precursor.
  
     0.665
wzyE
Putative common antigen polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.
 
  
 0.660
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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