STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pucAPutative xanthine dehydrogenase subunit A. (336 aa)    
Predicted Functional Partners:
APC13132.1
MobA-like NTP transferase domain protein.
 
  
 0.972
hcrC_1
4-hydroxybenzoyl-CoA reductase subunit gamma.
 
  
 0.910
xdhA
Xanthine dehydrogenase molybdenum-binding subunit.
 
  
 0.903
hcrC_2
4-hydroxybenzoyl-CoA reductase subunit gamma.
 
  
 0.828
ndhM
Nicotinate dehydrogenase medium molybdopterin subunit.
 
  
 0.811
fdhC
Fructose dehydrogenase cytochrome subunit precursor.
 
     0.597
moaC
Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
 0.492
modA
Molybdate-binding periplasmic protein precursor.
 
   
 0.409
Your Current Organism:
Providencia rettgeri
NCBI taxonomy Id: 587
Other names: ATCC 29944, Bacterium rettgeri, CCUG 14804, CIP 103182, DSM 4542, LMG 3259, LMG:3259, NCTC 11801, P. rettgeri, Proteus rettgeri, Shigella rettgeri
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